Bioinformatics research papers
All articles are listed on pubmed and are freely available via pubmed ical engineering and computational international, peer reviewed, open access journal that covers topics in biomedical engineering, bioinformatics, systems biology, and computational biology, in particular papers using computational methods to address complex problems in today’s medicine and biology. This paper provides a comprehensive summary of several data analytical techniques available for bioinformatics researchers and computer scientists. The journal has a particular focus on development and use of new resources, technologies and techniques, as well as how findings can be applied to biological research and in an industrial context.
This article reviews our current knowledge of the mechanism and regulation of mammalian mirna expression and points out areas of research that may enhance our understanding of how the specificity and efficiency of mirna production is controlled in vivo. Single-molecule, real-time sequencing developed by pacific biosciences offers longer read lengths than the second-generation sequencing (sgs) technologies, making it well-suited for unsolved problems in genome, transcriptome, and epigenetics research. Brief review on the human encyclopedia of dna elements (encode) 11, issue 3, june 2013, pages u qu | xiangdong encyclopedia of dna elements (encode) project is an international research consortium that aims to identify all functional elements in the human genome sequence.
International journal of bioinformatics research and applications > forthcoming ational journal of bioinformatics research and applications these articles have been peer-reviewed and accepted for publication in ijbra, but are pending final changes, are not yet published and may not appear here in their final order of publication until they are assigned to issues. The problem of inferring disease causing genes and dysregulated obtained a vital position in computational biology research. Objectives of ijbra are to develop, promote and coordinate the development and practice of bioinformatics and computational biology.
This review presents an overview of the bioinformatics resources and approaches for the study of rice- magnaporthe interaction. S approaches to biology and disease enable translational systems 10, issue 4, august 2012, pages hood | qiang development and application of systems strategies to biology and disease are transforming medical research and clinical practice in an unprecedented rate. With the development of genomics and bioinformatics, especially the extensive applications of high-throughput sequencing technology, more transcriptional units with little or no protein-coding potential have been discovered.
Computational methodology to overcome the challenges associated with the search for specific enzyme targets to develop drugs against leishmania a catharina, carlyle ribeiro lima, alexander franca, ana carolina ramos guimarães, marcelo alves-ferreira, pierre tuffery, philippe derreumaux, nicolas ormatics and biology insights 2017:11 ology | published on 12 jun transfer learning for improved mortality prediction in a data-scarce hospital desautels, jacob calvert, jana hoffman, qingqing mao, melissa jay, grant fletcher, chris barton, uli chettipally, yaniv kerem, ritankar ical informatics insights 2017:9 al research | published on 12 jun l coherence tomography technology and quality improvement methods for optical coherence tomography images of skin: a short adabi, zahra turani, emad fatemizadeh, anne clayton, mohammadreza ical engineering and computational biology 2017:8 review | published on 12 jun ras gene expression levels are influenced by the mutational status of ras genes and both upstream and downstream ras pathway m stephens, ming yi, bailey kessing, dwight v nissley, frank informatics 2017:16 al research | published on 08 jun 2017. You can get recognition for it by publishing a data note in bmc research cement: we are recruiting new associate are recruiting new associate editors to join our international editorial board, helping to provide expertise on a wide range of subjects within the area of ed article: ad-libs: inferring ancestry across hybrid genomes using low-coverage sequence study by schaefer et al. Software application for mining and presenting relevant cancer clinical trials per cancer m gandy, jordan gumm, amanda l blackford, elana j fertig, luis a informatics 2017:16 al research | published on 22 jun 2017.
Metagenomic analysis of bacterial microbiota in the digestive tract of s carels, marcial gumiel, fabio faria da mota, carlos josé de carvalho moreira, patricia ormatics and biology insights 2017:11 al research | published on 27 sep etic regulation of gene expression induced by butyrate in colorectal cancer: involvement of s bishop, huawen xu, gareth cs & epigenetics 2017:9 | published on 25 sep s in alternative splicing as pharmacodynamic markers for sudemycin thurman, jacob van doorn, barbara danzer, thomas r webb, stefan ker insights 2017:12 report | published on 12 sep ormatics study of m. Informatics 2017:16 ology | published on 18 aug ker: identifying phylogenetic markers at the population -mien ke, chun-ping yu, yu-ching liu, isheng j ionary bioinformatics 2017:13 | published on 16 aug ed-based graphics processing unit cluster platform for multiple sequence -da wei, hui-jun cheng, chun-yuan lin, jin ye, kuan-yu ionary bioinformatics 2017:13 | published on 08 aug le testing in the context of gene discovery in sickle cell disease using genome-wide association cs insights 2017:10 | published on 01 aug tency and variability of dna methylation in women during puberty, young adulthood, and chen, nandini mukherjee, vimala devi janjanam, s hasan arshad, ramesh j kurukulaaratchy, john w holloway, hongmei zhang, wilfried cs & epigenetics 2017:9 al research | published on 28 jul -oncology integrative networks: elucidating the influences of osteosarcoma sharma, enrico informatics 2017:16 al research | published on 26 jul -in-flux-expressions methodology: toward a robust mathematical framework for quantitative systems pharmacology t mcquade, ruth e abrams, jeffrey s barrett, benedetto piccoli, karim regulation and systems biology 2017:11 | published on 26 jul e nearest neighbor search on a protein-protein interaction network to infer protein-disease t suratanee, kitiporn ormatics and biology insights 2017:11 al research | published on 13 jul tion with dimension reduction of multiple molecular data sources for patient kaplan, eric f informatics 2017:16 ology | published on 11 jul fication of very small open reading frames in the genomes of holmes jungle virus, ord river virus, and wongabel virus of the genus , gubala, susan walsh, jane mcallister, richard weir, steven davis, lorna melville, ian mitchell, dieter bulach, penny gauci, alex skvortsov, david ionary bioinformatics 2017:13 | published on 11 jul impact of collisions on the ability to detect rare mutant alleles using barcode-type next-generation sequencing vanliere canzoniero, karen cravero, ben ho informatics 2017:16 al research | published on 10 jul ts into signaling in cell-based therapy for heart c rieger, bryon a tompkins, monisha banerjee, makoto natsumeda, victoria florea, ivonne h transduction insights 2017:6 | published on 10 jul assessment of database-validated microrna target genes in normal colonic mucosa: implications for pathway l slattery, jennifer s herrick, john r stevens, roger k wolff, lila e informatics 2017:16 al research | published on 23 jun stic impact of urokinase plasminogen activator receptor expression in pancreatic cancer: malignant versus stromal a wl de geus, victor m baart, martin c boonstra, peter jk kuppen, hendrica ajm prevoo, andrew p mazar, bert a bonsing, hans morreau, cornelis jh van de velde, alexander l vahrmeijer, cornelis fm ker insights 2017:12 | published on 22 jun 2017. Forthcoming articles must be purchased for the purposes of research, teaching and private study only.
Rnbioinformatics has played a significant role in storage and interpretation of the data made available by various wet laboratory experiments, into useful biological information. Several researches especially in the regulation of blood glucose were carried out and still remained an open challenge. To my author ormatics journals and research articles - libertas of open access peer reviewed bioinformatics journals & associated research articles.
Due to multiple advantages of peripheral blood cells over fibroblasts from skin biopsy, the use of blood mononuclear cells (mncs) instead of skin fibroblasts will expedite reprogramming research and broaden the application of reprogramming technology. The journal also recognizes the centrality of computational biology in these ionary international, peer reviewed, open access journal focusing on evolutionary bioinformatics. V stabler, eulàlia montell, josep vergés, janet l huebner, virginia byers ker insights 2017:12 report | published on 24 aug zed next-generation sequencing genotype-haplotype calling for genome variability navarro, bruno nevado, porfidio hernández, gonzalo vera, sebastián e ionary bioinformatics 2017:13 al research | published on 24 aug te mitochondrial genomes of the cherskii’s sculpin and siberian taimen reveal genbank entry errors: incorrect species identification and recombinant mitochondrial y s balakirev, pavel a saveliev, francisco j ionary bioinformatics 2017:13 report | published on 24 aug ve multiview nonnegative matrix factorization algorithm for integration of multimodal biomedical a ray, wenke liu, david fenyö.
Recent research indicates that the epigenetic role of non-coding rnas (ncrnas) is an integral component of this regulatory network. Some of the concepts emphasized are definition of big data; architectural platforms supporting data analytics; followed by the application of above mentioned analytical techniques towards complex problems in bioinformatics. New opportunities in the research domain of the forensic studies emerge by harnessing the power of ngs technology, which can be applied to simultaneously analyzing multiple loci of forensic interest in different genetic contexts, such as autosomes, mitochondrial and sex chromosomes.
In this context, the paper is an attempt to highlight the influence of big data in bioinformatics. Recent advancement in next-generation sequencing techniques and its computational analysis by khalid raza, sabahuddin ahmad abstract: next generation sequencing (ngs), a recently evolved technology, have served a lot in the research and development sector of our society. The journal recognizes that scientific collaborations across traditional disciplines can yield exponential synergistic gains: cancer research benefits from advances in many fields, including genomics and proteomics, mass spectrometry and radio imaging, computer science and biostatistics including machine learning and artificial intelligence, and medical informatics.